Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ457_20695 | Q87KN9 | + | 1084669 - 1087257 | 91234.9 |
| mfs transporter | PQ457_20700 | P77389 | + | 1087490 - 1088623 | 38557.9 |
| hypothetical protein | PQ457_20705 | Not Available | + | 1088658 - 1089041 | 13591.5 |
| hypothetical protein | PQ457_20710 | Not Available | - | 1089051 - 1089674 | 23444.8 |
| duf4031 domain-containing protein | PQ457_20715 | Not Available | + | 1089701 - 1090117 | 15533.6 |
| methyl-accepting chemotaxis protein | PQ457_20720 | P02942 | + | 1090186 - 1090786 | 21113.9 |
| amp-binding protein | PQ457_20725 | O06417 | - | 1090811 - 1092376 | 56147.6 |
| alcohol dehydrogenase catalytic domain-containing protein | PQ457_20730 | Q06004 | - | 1092384 - 1093391 | 35017.4 |
| 2,4'-dihydroxyacetophenone dioxygenase family protein | PQ457_20735 | Not Available | - | 1093407 - 1093943 | 19893.7 |
| sdr family oxidoreductase | PQ457_20740 | Q9F7E0 | - | 1093982 - 1094740 | 26312.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.