Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | PQ457_20645 | P9WHK0 | - | 1074403 - 1075077 | 24181.5 |
| hypothetical protein | PQ457_20650 | Q2SFK0 | - | 1075187 - 1075534 | 12806.4 |
| hypothetical protein | PQ457_20655 | Not Available | + | 1076033 - 1076407 | 11376.1 |
| ompa family protein | PQ457_20660 | P84838 | + | 1076564 - 1077685 | 38513.2 |
| histidine-type phosphatase | PQ457_20665 | P07102 | - | 1077775 - 1078956 | 40970.9 |
| hypothetical protein | PQ457_20670 | Not Available | - | 1078956 - 1079090 | 4521.49 |
| rmd1 family protein | PQ457_20675 | Q8CI78 | + | 1079277 - 1080125 | 31286.7 |
| tonb-dependent receptor | PQ457_20680 | P17315 | + | 1080268 - 1083024 | 99554.6 |
| sigma-70 family rna polymerase sigma factor | PQ457_20685 | Not Available | + | 1083140 - 1083715 | 20811.9 |
| fecr domain-containing protein | PQ457_20690 | P23485 | + | 1083712 - 1084668 | 34139.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.