Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PQ457_20495 | Not Available | + | 1036136 - 1038943 | 100934.0 |
| hypothetical protein | PQ457_20500 | Not Available | + | 1039027 - 1039896 | 31363.5 |
| diguanylate cyclase | PQ457_20505 | Q8EGF8 | - | 1039928 - 1041625 | 61849.7 |
| hypothetical protein | PQ457_20510 | Not Available | - | 1041745 - 1043091 | 48615.5 |
| glycosyltransferase family 2 protein | PQ457_20515 | O34319 | - | 1043091 - 1044023 | 33649.4 |
| hypothetical protein | PQ457_20520 | Not Available | - | 1044020 - 1045138 | 39853.2 |
| slbb domain-containing protein | PQ457_20525 | P42213 | - | 1045135 - 1047033 | 65901.0 |
| aldolase/citrate lyase family protein | PQ457_20530 | Not Available | - | 1047104 - 1047910 | 29454.5 |
| cdp-glucose 4,6-dehydratase | PQ457_20535 | P26397 | - | 1047938 - 1049053 | 40365.3 |
| glucose-1-phosphate cytidylyltransferase | PQ457_20540 | Q8Z5I4 | - | 1049047 - 1049874 | 30462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.