Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide riboside transporter pnuc | PQ457_20345 | P24520 | - | 1000233 - 1000784 | 20459.2 |
| phosphotransferase | PQ457_20350 | B9JT39 | - | 1000784 - 1001875 | 38943.4 |
| tonb-dependent receptor | PQ457_20355 | A1JTG3 | - | 1001910 - 1004156 | 81161.4 |
| duf2520 domain-containing protein | PQ457_20360 | Not Available | + | 1004455 - 1005378 | 31404.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | PQ457_20365 | Q9AHG3 | - | 1005382 - 1006458 | 38685.3 |
| tetr family transcriptional regulator | PQ457_20370 | Q0S868 | + | 1006581 - 1007225 | 23750.7 |
| magnesium transporter cora family protein | PQ457_20375 | Q7M9C0 | - | 1007222 - 1008160 | 34921.4 |
| alpha-glucosidase | PQ457_20380 | O06994 | - | 1008284 - 1010014 | 63729.5 |
| tryptophan 7-halogenase | PQ457_20385 | P95480 | - | 1010011 - 1011513 | 55329.8 |
| tryptophan 7-halogenase | PQ457_20390 | P95480 | - | 1011510 - 1013048 | 57247.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.