Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | PQ457_20245 | Q53TZ2 | + | 970694 - 971617 | 32853.7 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | PQ457_20250 | A7LXS9 | + | 971622 - 974111 | 90387.5 |
| glycosyl hydrolase 53 family protein | PQ457_20255 | P48841 | + | 974125 - 975207 | 39733.2 |
| tonb-dependent receptor | PQ457_20260 | Q0SY25 | - | 975317 - 977905 | 92943.7 |
| efflux rnd transporter permease subunit | PQ457_20265 | P25197 | + | 978310 - 981495 | 113448.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_20270 | P24180 | + | 981488 - 982651 | 41381.9 |
| efflux transporter outer membrane subunit | PQ457_20275 | Q8CWA4 | + | 982662 - 984038 | 48473.5 |
| lysr family transcriptional regulator | PQ457_20280 | A1JI47 | - | 984418 - 985266 | 30974.3 |
| hypothetical protein | PQ457_20285 | Not Available | + | 985478 - 985693 | 7458.54 |
| fusc family protein | PQ457_20290 | D2C1Z6 | + | 985893 - 987929 | 72506.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.