Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| precorrin-4 c(11)-methyltransferase | PQ457_20195 | O68100 | + | 960483 - 961268 | 27368.0 |
| cobyrinate a,c-diamide synthase | PQ457_20200 | O68108 | + | 961265 - 962572 | 45899.5 |
| precorrin-6a synthase (deacetylating) | PQ457_20205 | P21636 | + | 962569 - 963318 | 26980.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PQ457_20210 | P29930 | + | 963311 - 963928 | 22640.4 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | PQ457_20215 | Q6BF16 | - | 963997 - 964644 | 21559.2 |
| 2-dehydro-3-deoxygalactonokinase | PQ457_20220 | Q92RN7 | - | 964641 - 965510 | 30118.4 |
| sodium/sugar symporter | PQ457_20225 | P96169 | - | 965512 - 967089 | 55623.4 |
| fcd domain-containing protein | PQ457_20230 | P31475 | + | 967175 - 967894 | 25888.9 |
| smp-30/gluconolactonase/lre family protein | PQ457_20235 | Q9A9Z1 | - | 967904 - 968761 | 31132.6 |
| dihydroxy-acid dehydratase family protein | PQ457_20240 | Q9A9Z2 | - | 968773 - 970566 | 63505.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.