Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hoxn/hupn/nixa family nickel/cobalt transporter | PQ457_20145 | P23516 | + | 949260 - 950225 | 34327.6 |
| cobalamin biosynthesis protein cobw | PQ457_20150 | P29937 | + | 950695 - 951726 | 36084.4 |
| cobaltochelatase subunit cobn | PQ457_20155 | P29929 | + | 951732 - 955001 | 115160.0 |
| cobalamin biosynthesis protein cobg | PQ457_20160 | P21637 | + | 954998 - 956086 | 38254.0 |
| precorrin-8x methylmutase | PQ457_20165 | P21638 | + | 956086 - 956715 | 21674.4 |
| precorrin-2 c(20)-methyltransferase | PQ457_20170 | P21639 | + | 956712 - 957455 | 26909.8 |
| precorrin-3b c(17)-methyltransferase | PQ457_20175 | P21640 | + | 957452 - 958207 | 26747.5 |
| cobalt-precorrin-6a reductase | PQ457_20180 | O68098 | - | 958177 - 958932 | 26924.7 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | PQ457_20185 | P21921 | + | 958931 - 960124 | 41734.7 |
| cobalamin biosynthesis protein | PQ457_20190 | Not Available | + | 960106 - 960486 | 12344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.