Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4a-hydroxytetrahydrobiopterin dehydratase | PQ457_20095 | A5V667 | + | 939323 - 939601 | 10550.8 |
| hypothetical protein | PQ457_20100 | Not Available | - | 939656 - 940255 | 21134.2 |
| hupe/urej family protein | PQ457_20105 | Not Available | - | 940255 - 940914 | 23907.7 |
| hypothetical protein | PQ457_20110 | Not Available | - | 940996 - 941367 | 12449.0 |
| duf4198 domain-containing protein | PQ457_20115 | P44276 | - | 941393 - 942100 | 25242.4 |
| hypothetical protein | PQ457_20120 | Not Available | + | 942526 - 942927 | 14185.9 |
| tonb-dependent receptor | PQ457_20125 | Not Available | + | 943032 - 945188 | 76909.0 |
| energy transducer tonb | PQ457_20130 | Q05613 | + | 945198 - 945869 | 22877.8 |
| chloride channel protein | PQ457_20135 | Q8XTT4 | + | 945918 - 947693 | 61733.2 |
| prolyl aminopeptidase | PQ457_20140 | O32449 | - | 947703 - 948653 | 35578.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.