Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cyanase | PQ457_19945 | B1JA05 | - | 904675 - 905145 | 16911.4 |
| carbonic anhydrase | PQ457_19950 | Q9I262 | - | 905223 - 905876 | 23176.5 |
| transcriptional regulator cynr | PQ457_19955 | Q8X4M5 | + | 905976 - 906875 | 33045.9 |
| hypothetical protein | PQ457_19960 | Q5QWY8 | - | 906968 - 907348 | 12486.8 |
| hypothetical protein | PQ457_19965 | Not Available | + | 907324 - 907617 | 10517.2 |
| alginate export family protein | PQ457_19970 | Not Available | - | 907601 - 909097 | 54359.8 |
| dicarboxylate/amino acid:cation symporter | PQ457_19975 | Q1MDR5 | - | 909152 - 910501 | 46706.0 |
| atp-binding protein | PQ457_19980 | P13633 | + | 910741 - 912468 | 62226.4 |
| sigma-54 dependent transcriptional regulator | PQ457_19985 | P13632 | + | 912465 - 913769 | 47658.6 |
| amidohydrolase | PQ457_19990 | O34355 | - | 913794 - 915524 | 62329.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.