Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-bisphosphatase | PQ457_01240 | Q03224 | + | 272613 - 273590 | 34079.2 |
| ribose-phosphate pyrophosphokinase | PQ457_01245 | Q9AAV6 | + | 273766 - 274701 | 33143.1 |
| cyclase family protein | PQ457_01250 | Q8Y1D0 | + | 274706 - 275356 | 23095.7 |
| helix-turn-helix domain-containing protein | PQ457_01255 | Not Available | - | 275364 - 276308 | 34774.9 |
| inositol monophosphatase family protein | PQ457_01260 | Q6NPM8 | + | 276481 - 277284 | 28477.5 |
| gamma-glutamylcyclotransferase | PQ457_01265 | Q9FIX2 | + | 277281 - 277685 | 14360.1 |
| srpbcc family protein | PQ457_01270 | Not Available | - | 277666 - 278667 | 37321.3 |
| 50s ribosomal protein l35 | PQ457_01275 | Q2GAJ1 | + | 278859 - 279062 | 7531.36 |
| 50s ribosomal protein l20 | PQ457_01280 | Q2GAJ0 | + | 279076 - 279438 | 13392.5 |
| helix-turn-helix domain-containing protein | PQ457_01285 | Not Available | + | 279658 - 280509 | 31146.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.