Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| capa family protein | PQ457_19895 | P55651 | + | 893346 - 895031 | 60702.4 |
| mfs transporter | PQ457_19900 | P70786 | - | 895093 - 896370 | 45395.5 |
| hypothetical protein | PQ457_19905 | Not Available | + | 897187 - 897486 | 11090.5 |
| type iv secretion system dna-binding domain-containing protein | PQ457_19910 | P09130 | + | 897470 - 899944 | 91986.5 |
| methyl-accepting chemotaxis protein | PQ457_19915 | P22706 | + | 899949 - 901799 | 66760.7 |
| methyl-accepting chemotaxis protein | PQ457_19920 | Not Available | - | 901851 - 902174 | 11731.9 |
| voc family protein | PQ457_19925 | A1YPR3 | - | 902200 - 902616 | 15006.1 |
| pyridoxamine 5'-phosphate oxidase family protein | PQ457_19930 | Not Available | - | 902609 - 903220 | 22750.8 |
| tetr/acrr family transcriptional regulator | PQ457_19935 | O34619 | - | 903320 - 903895 | 20550.7 |
| duf1348 family protein | PQ457_19940 | Not Available | - | 903892 - 904356 | 18228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.