Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_19845 | Not Available | - | 881645 - 881908 | 9279.39 |
| tyrosine-type recombinase/integrase | PQ457_19850 | P9WMB2 | + | 882391 - 883617 | 45164.6 |
| site-specific integrase | PQ457_19855 | P9WMB2 | + | 883614 - 884789 | 43676.7 |
| copg family transcriptional regulator | PQ457_19860 | P55533 | + | 884869 - 885138 | 9576.58 |
| type ii toxin-antitoxin system rele/pare family toxin | PQ457_19865 | P55534 | + | 885135 - 885437 | 11078.2 |
| tricarballylate/proton symporter tcuc | PQ457_19870 | P0A2G4 | - | 885829 - 887130 | 45846.2 |
| tonb-dependent receptor | PQ457_19875 | A5F4P6 | - | 887197 - 890013 | 99585.6 |
| abc transporter substrate-binding protein | PQ457_19880 | Not Available | - | 890010 - 891062 | 38472.9 |
| response regulator transcription factor | PQ457_19885 | E1WA34 | + | 891196 - 891864 | 24262.3 |
| sensor histidine kinase | PQ457_19890 | Q9HV31 | + | 891866 - 893272 | 50810.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.