Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | PQ457_19745 | O34660 | + | 855916 - 857406 | 53180.7 |
| maleylacetate reductase | PQ457_19750 | A1IIX4 | + | 857414 - 858493 | 37342.9 |
| dioxygenase | PQ457_19755 | Q471I0 | + | 858490 - 859338 | 30228.0 |
| rieske 2fe-2s domain-containing protein | PQ457_19760 | Not Available | + | 859331 - 859705 | 13491.2 |
| tonb-dependent receptor | PQ457_19765 | A5F661 | - | 859936 - 862380 | 88125.4 |
| helix-turn-helix domain-containing protein | PQ457_19770 | B1Q2A8 | - | 862507 - 863451 | 35181.0 |
| carbon-nitrogen hydrolase family protein | PQ457_19775 | Q89GE3 | - | 863690 - 864700 | 36200.1 |
| mfs transporter | PQ457_19780 | O51798 | - | 864763 - 865977 | 41575.1 |
| lysr family transcriptional regulator | PQ457_19785 | Q85G62 | - | 866124 - 867041 | 34097.5 |
| srpbcc family protein | PQ457_19790 | P23099 | + | 867168 - 868505 | 49248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.