Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | PQ457_19695 | P28809 | + | 847537 - 848433 | 33646.6 |
| tetr/acrr family transcriptional regulator | PQ457_19700 | Q0S868 | - | 848470 - 849111 | 23319.4 |
| arylsulfatase | PQ457_19705 | Not Available | - | 849184 - 849843 | 22789.5 |
| alpha/beta fold hydrolase | PQ457_19710 | Q59093 | - | 849843 - 850604 | 26918.4 |
| 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | PQ457_19715 | P22636 | - | 850601 - 851428 | 29172.9 |
| hypothetical protein | PQ457_19720 | Not Available | - | 851421 - 851726 | 11404.4 |
| alpha/beta hydrolase | PQ457_19725 | Q4WZB3 | - | 851723 - 852883 | 42119.4 |
| fad-dependent oxidoreductase | PQ457_19730 | O06489 | - | 852925 - 854037 | 39497.0 |
| hydroxyquinol 1,2-dioxygenase | PQ457_19735 | Not Available | + | 854335 - 854844 | 18482.1 |
| hydroxyquinol 1,2-dioxygenase | PQ457_19740 | Not Available | + | 854885 - 855913 | 37979.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.