Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_19645 | Not Available | - | 832944 - 833282 | 12370.0 |
| lysr family transcriptional regulator | PQ457_19650 | P32008 | - | 833632 - 834537 | 33758.5 |
| rieske 2fe-2s domain-containing protein | PQ457_19655 | Q9AHG3 | + | 834978 - 836051 | 39897.8 |
| cyclase family protein | PQ457_19660 | Not Available | - | 836181 - 837197 | 36824.2 |
| tonb-dependent receptor | PQ457_19665 | P46359 | - | 837256 - 839538 | 81357.5 |
| mfs transporter | PQ457_19670 | A0LNN5 | - | 839565 - 840782 | 42566.2 |
| mfs transporter | PQ457_19675 | P96675 | + | 841339 - 842529 | 41050.8 |
| tonb-dependent receptor | PQ457_19680 | P46359 | - | 842749 - 845244 | 88407.5 |
| amidohydrolase family protein | PQ457_19685 | A5UMN6 | - | 845396 - 846766 | 48271.4 |
| ycii family protein | PQ457_19690 | P0AB56 | - | 847004 - 847357 | 12761.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.