Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ457_19545 | P46359 | + | 809193 - 811652 | 87462.7 |
| hypothetical protein | PQ457_19550 | Not Available | + | 812359 - 812499 | 5093.28 |
| methyl-accepting chemotaxis protein | PQ457_19555 | P50327 | - | 812523 - 812663 | 5238.37 |
| dihydrodipicolinate synthase family protein | PQ457_19560 | A4WJK5 | - | 812674 - 813693 | 38136.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | PQ457_19565 | P25526 | - | 813693 - 815168 | 51865.2 |
| ornithine cyclodeaminase family protein | PQ457_19570 | P58339 | - | 815171 - 816172 | 34484.5 |
| mfs transporter | PQ457_19575 | A0QYL8 | - | 816169 - 817500 | 46781.6 |
| tonb-dependent receptor | PQ457_19580 | Q9HUX3 | - | 817503 - 818990 | 53086.6 |
| tonb-dependent receptor | PQ457_19585 | P46359 | - | 819065 - 819793 | 25583.5 |
| fcd domain-containing protein | PQ457_19590 | P0ACL7 | + | 819930 - 820595 | 24899.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.