Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxylesterase family protein | PQ457_19495 | P37967 | + | 799209 - 800840 | 58117.5 |
| methyl-accepting chemotaxis protein | PQ457_19500 | Not Available | + | 800886 - 801116 | 8877.95 |
| hypothetical protein | PQ457_19505 | Not Available | + | 801479 - 801769 | 10789.9 |
| lysr family transcriptional regulator | PQ457_19510 | Q9EXL7 | - | 801682 - 802614 | 34370.0 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | PQ457_19515 | Q9AHG3 | + | 802716 - 803819 | 40822.4 |
| amidohydrolase family protein | PQ457_19520 | Q54LN9 | + | 804466 - 805482 | 37072.4 |
| lysr family transcriptional regulator | PQ457_19525 | P20669 | + | 805501 - 806433 | 35000.1 |
| voc family protein | PQ457_19530 | P17296 | + | 806500 - 807432 | 34174.6 |
| fumarylacetoacetate hydrolase family protein | PQ457_19535 | Q2KIB0 | + | 807410 - 808489 | 40284.8 |
| cytochrome b/b6 domain-containing protein | PQ457_19540 | P75925 | + | 808486 - 809061 | 20591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.