Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| division plane positioning atpase mipz | PQ457_01190 | Q57633 | + | 261936 - 262748 | 30409.4 |
| molecular chaperone dnaj | PQ457_01195 | Q78YY6 | + | 262750 - 263040 | 10606.0 |
| phosphomannomutase/phosphoglucomutase | PQ457_01200 | P45632 | + | 263037 - 264503 | 51227.1 |
| ligase-associated dna damage response dexh box helicase | PQ457_01205 | Q57742 | + | 264500 - 266932 | 88472.2 |
| biopolymer transporter exbd | PQ457_01210 | B0RLE8 | - | 266999 - 267448 | 16097.6 |
| biopolymer transporter exbd | PQ457_01215 | P50599 | - | 267478 - 268014 | 19141.0 |
| mota/tolq/exbb proton channel family protein | PQ457_01220 | B0RLE6 | - | 268154 - 268903 | 26025.8 |
| energy transducer tonb | PQ457_01225 | Not Available | - | 268998 - 269654 | 22636.3 |
| hypothetical protein | PQ457_01230 | Not Available | + | 270036 - 270878 | 29957.0 |
| homoserine dehydrogenase | PQ457_01235 | P29365 | + | 270955 - 272322 | 46835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.