Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_19345 | Not Available | - | 771816 - 772175 | 13146.4 |
| dj-1/pfpi family protein | PQ457_19350 | Q8G9F9 | - | 772504 - 773256 | 26277.0 |
| mbl fold metallo-hydrolase | PQ457_19355 | O34910 | - | 773303 - 774061 | 27111.9 |
| alpha/beta hydrolase | PQ457_19360 | O06734 | - | 774116 - 774904 | 27786.4 |
| alpha/beta hydrolase | PQ457_19365 | A0A2I1BT15 | - | 774927 - 775604 | 23248.7 |
| hd domain-containing protein | PQ457_19370 | Not Available | - | 775647 - 776291 | 23730.0 |
| glxa family transcriptional regulator | PQ457_19375 | A0A0H2ZIC3 | + | 776561 - 777526 | 34670.6 |
| is91 family transposase | PQ457_19380 | P55631 | - | 777901 - 779094 | 44176.8 |
| tyrosine-type recombinase/integrase | PQ457_19385 | P55632 | - | 779099 - 780007 | 33924.6 |
| tyrosine-type recombinase/integrase | PQ457_19390 | Q4UYY0 | - | 780184 - 780816 | 23862.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.