Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_19245 | Not Available | + | 750791 - 752110 | 46954.7 |
| heme-binding protein | PQ457_19250 | P0AEQ2 | + | 752152 - 752574 | 14193.1 |
| 2-hydroxymuconate tautomerase family protein | PQ457_19255 | Q93JW0 | + | 752707 - 752898 | 6802.38 |
| iclr family transcriptional regulator c-terminal domain-containing protein | PQ457_19260 | Q9KWS2 | - | 752914 - 753909 | 36752.4 |
| cyclase family protein | PQ457_19265 | A0NLY7 | + | 754518 - 755288 | 28534.8 |
| lrgb family protein | PQ457_19270 | P0AD19 | - | 755337 - 756056 | 24911.1 |
| cida/lrga family protein | PQ457_19275 | A8GC34 | - | 756049 - 756414 | 12486.9 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein | PQ457_19280 | O33477 | + | 756740 - 757642 | 34090.9 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein | PQ457_19285 | Q6J1Z5 | + | 757669 - 758478 | 28874.0 |
| methyl-accepting chemotaxis protein | PQ457_19290 | Not Available | + | 758640 - 760198 | 54989.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.