Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | PQ457_19195 | Q0K846 | - | 737641 - 738426 | 27567.7 |
| molybdopterin-dependent oxidoreductase | PQ457_19200 | Q71EW5 | - | 738481 - 741717 | 115995.0 |
| tonb-dependent receptor | PQ457_19205 | P46359 | - | 741822 - 744239 | 86371.9 |
| nuclear transport factor 2 family protein | PQ457_19210 | Not Available | - | 744362 - 744721 | 13689.3 |
| rida family protein | PQ457_19215 | Q9KWS2 | - | 744819 - 745283 | 16447.5 |
| fumarylacetoacetate hydrolase family protein | PQ457_19220 | Q9KWS3 | - | 745280 - 746023 | 26445.0 |
| fumarylacetoacetate hydrolase family protein | PQ457_19225 | P23149 | - | 746137 - 746925 | 27412.2 |
| 2-hydroxymuconic semialdehyde dehydrogenase | PQ457_19230 | Q9KWS5 | - | 746922 - 748379 | 51833.6 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein | PQ457_19235 | Q6J1Z5 | - | 748416 - 749225 | 28760.1 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein | PQ457_19240 | O33477 | - | 749252 - 750166 | 34507.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.