Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_19095 | Not Available | + | 710764 - 712692 | 67659.4 |
| conjugal transfer protein tran | PQ457_19100 | P24082 | + | 712749 - 713783 | 35751.6 |
| type-f conjugative transfer system pilin assembly protein trbc | PQ457_19105 | Not Available | + | 713755 - 714633 | 30941.4 |
| s26 family signal peptidase | PQ457_19110 | Not Available | + | 714605 - 715201 | 21667.7 |
| conjugal transfer protein traf | PQ457_19115 | O22022 | + | 715198 - 716085 | 32479.2 |
| hypothetical protein | PQ457_19120 | Not Available | + | 716091 - 716660 | 20393.2 |
| conjugal transfer protein trah | PQ457_19125 | P15069 | + | 716914 - 718332 | 51415.1 |
| conjugal transfer protein trag n-terminal domain-containing protein | PQ457_19130 | Not Available | + | 718341 - 722081 | 131432.0 |
| hypothetical protein | PQ457_19135 | Not Available | - | 722084 - 722488 | 15481.9 |
| hypothetical protein | PQ457_19140 | Not Available | + | 722703 - 722837 | 5117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.