Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system secretin trak | PQ457_19045 | Not Available | + | 702523 - 703299 | 27641.2 |
| trab/virb10 family protein | PQ457_19050 | P41067 | + | 703296 - 704624 | 45214.9 |
| trav family lipoprotein | PQ457_19055 | Not Available | + | 704648 - 705322 | 23991.1 |
| trac family protein | PQ457_19060 | P18004 | + | 705319 - 707850 | 93031.8 |
| hypothetical protein | PQ457_19065 | Not Available | + | 707831 - 708160 | 12011.8 |
| hypothetical protein | PQ457_19070 | Not Available | + | 708157 - 708567 | 15116.7 |
| hypothetical protein | PQ457_19075 | Not Available | + | 708564 - 708800 | 8409.66 |
| conjugal transfer protein traw | PQ457_19080 | P18472 | + | 708847 - 709440 | 21314.0 |
| trau family protein | PQ457_19085 | P18471 | + | 709437 - 710450 | 35970.9 |
| hypothetical protein | PQ457_19090 | Not Available | + | 710480 - 710767 | 9956.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.