Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthetase b family protein | PQ457_18995 | Not Available | - | 695338 - 697128 | 65660.9 |
| lasso peptide biosynthesis b2 protein | PQ457_19000 | Q9X2V8 | - | 697128 - 697799 | 24604.1 |
| benenodin family lasso peptide | PQ457_19005 | Not Available | - | 697894 - 698025 | 4557.22 |
| gntr family transcriptional regulator | PQ457_19010 | P37338 | - | 698184 - 698807 | 22977.7 |
| helix-turn-helix domain-containing protein | PQ457_19015 | Not Available | - | 698827 - 699237 | 15774.3 |
| hypothetical protein | PQ457_19020 | Not Available | - | 699388 - 699987 | 21706.4 |
| dsbc family protein | PQ457_19025 | P39691 | + | 700152 - 700982 | 29767.6 |
| hypothetical protein | PQ457_19030 | Not Available | + | 701188 - 701502 | 10818.7 |
| type iv conjugative transfer system protein tral | PQ457_19035 | Not Available | + | 701632 - 701898 | 10248.7 |
| trae/trak family type iv conjugative transfer system protein | PQ457_19040 | Not Available | + | 701904 - 702539 | 23133.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.