Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | PQ457_18945 | Q9A459 | - | 683561 - 683878 | 11745.9 |
| type ii toxin-antitoxin system pard family antitoxin | PQ457_18950 | Not Available | - | 683882 - 684160 | 10263.2 |
| hypothetical protein | PQ457_18955 | Not Available | - | 684343 - 685110 | 28740.5 |
| hypothetical protein | PQ457_18960 | Not Available | - | 685596 - 685916 | 11929.9 |
| hypothetical protein | PQ457_18965 | Not Available | - | 685909 - 686448 | 19704.9 |
| atp-binding protein | PQ457_18970 | Not Available | - | 686495 - 688309 | 65516.6 |
| rna polymerase sigma factor | PQ457_18975 | P23484 | + | 688857 - 689429 | 22070.2 |
| fecr domain-containing protein | PQ457_18980 | P23485 | + | 689426 - 690505 | 38632.8 |
| tonb-dependent receptor | PQ457_18985 | P17315 | + | 690575 - 693127 | 90474.6 |
| prolyl oligopeptidase family serine peptidase | PQ457_18990 | E8RUP5 | + | 693191 - 695350 | 78123.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.