Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aec family transporter | PQ457_01140 | P56949 | - | 251910 - 252839 | 31799.2 |
| diguanylate cyclase | PQ457_01145 | Q9A5I5 | + | 253068 - 254495 | 52439.9 |
| gnat family n-acetyltransferase | PQ457_01150 | Not Available | + | 254438 - 255085 | 23189.3 |
| eal domain-containing protein | PQ457_01155 | Q9I310 | - | 255095 - 256885 | 65557.6 |
| grea/greb family elongation factor | PQ457_01160 | B9JYZ7 | + | 257097 - 257555 | 16414.4 |
| carbon starvation csta family protein | PQ457_01165 | P15078 | + | 257616 - 259646 | 71170.1 |
| ybdd/yjix family protein | PQ457_01170 | P0AAT0 | + | 259643 - 259819 | 6590.93 |
| metalloregulator arsr/smtb family transcription factor | PQ457_01175 | P77295 | - | 259821 - 260147 | 11801.5 |
| metalloregulator arsr/smtb family transcription factor | PQ457_01180 | Q8UAA8 | - | 260196 - 260567 | 12753.6 |
| pantoate--beta-alanine ligase | PQ457_01185 | Q2G319 | - | 260965 - 261822 | 30269.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.