Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | PQ457_18895 | P15715 | + | 673755 - 675641 | 67887.5 |
| hypothetical protein | PQ457_18900 | Not Available | + | 675658 - 676842 | 42201.5 |
| pd-(d/e)xk nuclease family protein | PQ457_18905 | Not Available | + | 677134 - 678186 | 39618.9 |
| transposase | PQ457_18910 | P55640 | + | 678270 - 678617 | 12413.9 |
| is66 family insertion sequence element accessory protein tnpb | PQ457_18915 | P50359 | + | 678614 - 678961 | 12909.9 |
| is66 family transposase | PQ457_18920 | P50360 | + | 679060 - 680688 | 60697.8 |
| hypothetical protein | PQ457_18925 | Not Available | + | 680688 - 680909 | 8253.59 |
| hypothetical protein | PQ457_18930 | Not Available | - | 681308 - 681508 | 7274.03 |
| hypothetical protein | PQ457_18935 | Not Available | - | 681704 - 681949 | 9575.97 |
| mucr family transcriptional regulator | PQ457_18940 | P55613 | + | 682266 - 683324 | 36815.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.