Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | PQ457_18845 | Q5F882 | + | 661736 - 662152 | 15350.3 |
| hypothetical protein | PQ457_18850 | Not Available | - | 662441 - 664066 | 59962.9 |
| is110 family transposase | PQ457_18855 | P55626 | + | 664259 - 665368 | 41510.6 |
| suppressor of fused domain protein | PQ457_18860 | Not Available | - | 665673 - 666329 | 24415.7 |
| is66 family transposase | PQ457_18865 | P50360 | - | 666422 - 668047 | 59988.4 |
| is66 family insertion sequence element accessory protein tnpb | PQ457_18870 | P55503 | - | 668114 - 668467 | 12937.0 |
| transposase | PQ457_18875 | P55502 | - | 668464 - 668907 | 16118.5 |
| is110 family transposase | PQ457_18880 | P55626 | - | 669267 - 670376 | 41510.6 |
| hypothetical protein | PQ457_18885 | Not Available | + | 670556 - 671509 | 36230.7 |
| duf4209 domain-containing protein | PQ457_18890 | Not Available | + | 671604 - 673451 | 67543.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.