Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | PQ457_18795 | P08821 | + | 655546 - 655821 | 9402.17 |
| toprim domain-containing protein | PQ457_18800 | Not Available | - | 655874 - 656755 | 31991.1 |
| sigma factor-like helix-turn-helix dna-binding protein | PQ457_18805 | Not Available | - | 656766 - 657260 | 18205.8 |
| helix-turn-helix transcriptional regulator | PQ457_18810 | P11470 | + | 657530 - 658105 | 20647.9 |
| hypothetical protein | PQ457_18815 | Not Available | + | 658169 - 658513 | 12036.7 |
| hypothetical protein | PQ457_18820 | Not Available | + | 658564 - 659037 | 17325.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | PQ457_18825 | Not Available | + | 659086 - 659829 | 27499.2 |
| type ii toxin-antitoxin system vapc family toxin | PQ457_18830 | Not Available | + | 659819 - 660220 | 14149.1 |
| nucleotidyltransferase domain-containing protein | PQ457_18835 | Not Available | + | 660262 - 661182 | 35682.6 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | PQ457_18840 | Not Available | + | 661482 - 661736 | 9378.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.