Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding protein | PQ457_18695 | P0DV41 | + | 628411 - 629334 | 34074.2 |
| duf5597 domain-containing protein | PQ457_18700 | P48982 | + | 629828 - 631504 | 61429.7 |
| is91 family transposase | PQ457_18705 | P55631 | - | 632190 - 633383 | 44103.7 |
| tyrosine-type recombinase/integrase | PQ457_18710 | P55632 | - | 633388 - 634296 | 33910.6 |
| hypothetical protein | PQ457_18715 | Not Available | - | 634549 - 636675 | 78322.0 |
| hypothetical protein | PQ457_18720 | Not Available | - | 636672 - 638429 | 64225.7 |
| type ii toxin-antitoxin system rele/pare family toxin | PQ457_18725 | P55534 | - | 639025 - 639309 | 10786.0 |
| antitoxin of toxin-antitoxin stability system | PQ457_18730 | Not Available | - | 639306 - 639572 | 9876.7 |
| hepn domain-containing protein | PQ457_18735 | Not Available | - | 639892 - 640827 | 35963.2 |
| hypothetical protein | PQ457_18740 | Not Available | + | 641483 - 641710 | 8533.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.