Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | PQ457_18645 | Q87DQ5 | - | 619242 - 619571 | 12201.4 |
| is5 family transposase | PQ457_18650 | P76071 | + | 620124 - 621203 | 40837.4 |
| sir2 family protein | PQ457_18655 | J8G6Z1 | - | 621732 - 622547 | 30667.9 |
| non-canonical purine ntp pyrophosphatase | PQ457_18660 | Q5JEX8 | - | 622540 - 623097 | 21061.3 |
| adenosine deaminase | PQ457_18665 | B5ZXI3 | + | 623141 - 624130 | 35392.3 |
| imma/irre family metallo-endopeptidase | PQ457_18670 | Not Available | - | 624127 - 624912 | 29225.1 |
| hypothetical protein | PQ457_18675 | Not Available | - | 624909 - 625283 | 13706.9 |
| hypothetical protein | PQ457_18680 | Not Available | - | 625280 - 625867 | 21258.4 |
| adenylate/guanylate cyclase domain-containing protein | PQ457_18685 | P0DV40 | + | 626034 - 627566 | 55579.8 |
| hypothetical protein | PQ457_18690 | Not Available | + | 627563 - 628360 | 28762.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.