Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PQ457_18545 | C1C4R8 | + | 593891 - 594625 | 25186.5 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_18550 | Q5HPW0 | + | 594622 - 595401 | 26877.0 |
| d-lactate dehydrogenase | PQ457_18555 | P06149 | + | 595391 - 597106 | 62331.8 |
| tetr/acrr family transcriptional regulator | PQ457_18560 | P0ACT8 | - | 597116 - 597721 | 22906.5 |
| duf6379 domain-containing protein | PQ457_18565 | Not Available | - | 597814 - 598218 | 14910.2 |
| tim barrel protein | PQ457_18570 | Not Available | - | 598239 - 599141 | 33772.3 |
| mfs transporter | PQ457_18575 | P46105 | - | 599175 - 600632 | 51292.6 |
| gfo/idh/moca family oxidoreductase | PQ457_18580 | Q2I8V6 | + | 600944 - 602161 | 42922.1 |
| duf1080 domain-containing protein | PQ457_18585 | Not Available | + | 602195 - 603178 | 35609.5 |
| glycosyl hydrolase | PQ457_18590 | T2KNA8 | - | 603281 - 606709 | 123519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.