Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ457_18495 | P30864 | - | 583864 - 584862 | 36140.9 |
| nad-dependent succinate-semialdehyde dehydrogenase | PQ457_18500 | Q1JUP4 | + | 584994 - 586451 | 52251.5 |
| carboxymuconolactone decarboxylase family protein | PQ457_18505 | P20370 | + | 586476 - 586814 | 11977.2 |
| nad(p)h-quinone oxidoreductase | PQ457_18510 | Q53FA7 | + | 586811 - 587794 | 34886.3 |
| sgnh/gdsl hydrolase family protein | PQ457_18515 | Not Available | - | 588024 - 589265 | 43662.4 |
| methyl-accepting chemotaxis protein | PQ457_18520 | Q79CE8 | + | 589558 - 589695 | 5177.21 |
| tim barrel protein | PQ457_18525 | Q9Z596 | - | 589859 - 590638 | 28381.0 |
| mfs transporter | PQ457_18530 | Q796Q1 | + | 591082 - 592287 | 42853.2 |
| helix-turn-helix domain containing protein | PQ457_18535 | Not Available | + | 592297 - 592965 | 24440.6 |
| fumarylacetoacetate hydrolase family protein | PQ457_18540 | Q0B628 | + | 593031 - 593885 | 30756.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.