Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | PQ457_01090 | Not Available | - | 240645 - 241253 | 22057.3 |
| putative dna-binding domain-containing protein | PQ457_01095 | P44267 | - | 241231 - 241944 | 25653.9 |
| duf692 domain-containing protein | PQ457_01100 | Q6FDN0 | - | 241931 - 242770 | 30431.4 |
| hypothetical protein | PQ457_01105 | Not Available | - | 242758 - 243045 | 9710.72 |
| mbl fold metallo-hydrolase | PQ457_01110 | A3Q2B8 | - | 243066 - 244046 | 33899.4 |
| putative sulfate exporter family transporter | PQ457_01115 | Q8YEG4 | - | 244080 - 245162 | 36454.1 |
| lysr substrate-binding domain-containing protein | PQ457_01120 | P0ACR6 | - | 245369 - 246259 | 32035.5 |
| duf1592 domain-containing protein | PQ457_01125 | Not Available | + | 246566 - 249088 | 91811.7 |
| duf1552 domain-containing protein | PQ457_01130 | Not Available | + | 249085 - 250419 | 48351.5 |
| ankyrin repeat domain-containing protein | PQ457_01135 | A2AS55 | + | 250412 - 251710 | 44038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.