Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PQ457_18395 | P37959 | - | 560309 - 561058 | 25927.2 |
| arac family transcriptional regulator | PQ457_18400 | P35319 | + | 561156 - 562061 | 32143.1 |
| hypothetical protein | PQ457_18405 | Not Available | + | 562784 - 562921 | 4943.24 |
| glycosyltransferase family 4 protein | PQ457_18410 | A6W6D9 | + | 562943 - 565189 | 81546.0 |
| glycoside hydrolase family 130 protein | PQ457_18415 | B0K2C2 | + | 565196 - 566500 | 48540.0 |
| transglutaminase family protein | PQ457_18420 | Q49757 | + | 566621 - 567433 | 30361.4 |
| duf1003 domain-containing protein | PQ457_18425 | Not Available | - | 567537 - 568082 | 20487.6 |
| hypothetical protein | PQ457_18430 | Not Available | - | 569149 - 569523 | 13470.2 |
| ferritin-like fold-containing protein | PQ457_18435 | Q8U1L3 | - | 569523 - 570077 | 20264.0 |
| ompa family protein | PQ457_18440 | P84838 | - | 570148 - 571269 | 38775.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.