Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate enol-lactonase | PQ457_18345 | P00632 | + | 547999 - 548781 | 27398.0 |
| fad-dependent oxidoreductase | PQ457_18350 | Q5S3I2 | + | 548774 - 550006 | 43533.4 |
| glutathione s-transferase | PQ457_18355 | P0A9D3 | - | 550010 - 550633 | 22562.0 |
| yafy family protein | PQ457_18360 | O34920 | + | 550710 - 551402 | 26267.8 |
| duf1501 domain-containing protein | PQ457_18365 | Not Available | - | 551399 - 552622 | 43527.1 |
| duf1800 domain-containing protein | PQ457_18370 | Not Available | - | 552643 - 554088 | 53802.0 |
| integrase arm-type dna-binding domain-containing protein | PQ457_18375 | P76542 | + | 554517 - 555899 | 51743.6 |
| is256 family transposase | PQ457_18380 | P60231 | + | 556231 - 557442 | 45015.6 |
| hypothetical protein | PQ457_18385 | Not Available | - | 557820 - 558134 | 11640.0 |
| hypothetical protein | PQ457_18390 | Not Available | - | 558517 - 559797 | 47494.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.