Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein | PQ457_18245 | A0A0H3C7V4 | + | 527806 - 528846 | 36215.9 |
| tade/tadg family type iv pilus assembly protein | PQ457_18250 | Not Available | + | 529020 - 529670 | 22012.5 |
| hypothetical protein | PQ457_18255 | Not Available | + | 529664 - 530275 | 21266.8 |
| pilus assembly protein tadg-related protein | PQ457_18260 | Not Available | + | 530286 - 531965 | 59515.8 |
| cytochrome bd-i oxidase subunit cydx | PQ457_18265 | Q2YKD6 | - | 532053 - 532163 | 4051.83 |
| cytochrome d ubiquinol oxidase subunit ii | PQ457_18270 | P0ABK4 | - | 532177 - 533325 | 41068.1 |
| cytochrome ubiquinol oxidase subunit i | PQ457_18275 | Q09049 | - | 533338 - 534900 | 57317.9 |
| atp-binding cassette domain-containing protein | PQ457_18280 | P29018 | + | 535042 - 536658 | 56220.3 |
| atp-binding cassette domain-containing protein | PQ457_18285 | P23886 | + | 536655 - 538193 | 53052.0 |
| ompa family protein | PQ457_18290 | Q05146 | - | 538312 - 539181 | 30431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.