Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | PQ457_18195 | O31564 | + | 519236 - 519637 | 14929.1 |
| histidine kinase | PQ457_18200 | Not Available | + | 519753 - 520160 | 15067.5 |
| metal-sensing transcriptional repressor | PQ457_18205 | A0PLB8 | - | 520164 - 520430 | 9743.8 |
| nickel/cobalt efflux transporter | PQ457_18210 | A9N3J5 | - | 520440 - 521312 | 31043.8 |
| sodium:calcium antiporter | PQ457_18215 | Q57556 | + | 521599 - 522597 | 34956.9 |
| hypothetical protein | PQ457_18220 | Not Available | - | 522697 - 523077 | 14018.5 |
| lactonase family protein | PQ457_18225 | T2KMF9 | - | 523249 - 524403 | 41455.1 |
| laci family dna-binding transcriptional regulator | PQ457_18230 | P0ACN9 | - | 524482 - 525489 | 36999.0 |
| lysr substrate-binding domain-containing protein | PQ457_18235 | P72131 | + | 525817 - 526761 | 34628.9 |
| outer membrane beta-barrel protein | PQ457_18240 | Q45110 | - | 526849 - 527439 | 20756.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.