Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_18145 | Not Available | - | 508784 - 509122 | 12593.1 |
| metalloregulator arsr/smtb family transcription factor | PQ457_18150 | P77295 | - | 509192 - 509524 | 12022.9 |
| efflux rnd transporter permease subunit | PQ457_18155 | P25197 | - | 509521 - 512721 | 113150.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_18160 | Not Available | - | 512718 - 513722 | 33707.5 |
| rhodanese-like domain-containing protein | PQ457_18165 | P73801 | - | 513743 - 514081 | 11660.0 |
| fad/nad(p)-binding oxidoreductase | PQ457_18170 | B7JBP8 | + | 514248 - 515561 | 47498.1 |
| duf2892 domain-containing protein | PQ457_18175 | Not Available | + | 515558 - 515761 | 7101.93 |
| tolc family protein | PQ457_18180 | Q8G0Y6 | + | 515774 - 517042 | 43737.1 |
| carboxymuconolactone decarboxylase family protein | PQ457_18185 | P27749 | + | 517055 - 517405 | 12079.7 |
| chloride channel protein | PQ457_18190 | B7MV39 | - | 517407 - 519167 | 61107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.