Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase acna | PQ457_17995 | Q8ZP52 | + | 467395 - 469851 | 86566.3 |
| nad-dependent succinate-semialdehyde dehydrogenase | PQ457_18000 | Q1JUP4 | - | 469897 - 471327 | 50921.2 |
| aldehyde dehydrogenase | PQ457_18005 | O69763 | - | 471369 - 472769 | 48227.4 |
| alpha/beta hydrolase | PQ457_18010 | Q9EX73 | - | 472914 - 473951 | 36127.7 |
| hypothetical protein | PQ457_18015 | Not Available | - | 473964 - 474524 | 19786.7 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_18020 | O32229 | - | 474569 - 475360 | 27581.1 |
| sdr family oxidoreductase | PQ457_18025 | O31680 | - | 475441 - 476190 | 25784.9 |
| lysr family transcriptional regulator | PQ457_18030 | P30864 | + | 476323 - 477240 | 33258.6 |
| hypothetical protein | PQ457_18035 | Not Available | + | 477261 - 477416 | 5579.69 |
| tonb-dependent receptor | PQ457_18040 | P46359 | + | 477533 - 479995 | 87630.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.