Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | PQ457_17945 | Q8KI76 | + | 455620 - 456117 | 17209.8 |
| tetr/acrr family transcriptional regulator | PQ457_17950 | Not Available | + | 456110 - 456727 | 22454.9 |
| carotenoid oxygenase family protein | PQ457_17955 | Q52008 | - | 457024 - 458496 | 54817.8 |
| tonb-dependent receptor | PQ457_17960 | P0C2M9 | + | 458771 - 461080 | 83049.5 |
| fumarylacetoacetate hydrolase family protein | PQ457_17965 | Q0QFQ3 | + | 461268 - 462158 | 32263.8 |
| cupin domain-containing protein | PQ457_17970 | Q7X284 | + | 462166 - 463101 | 34775.3 |
| fad-dependent monooxygenase | PQ457_17975 | E2CYT2 | + | 463150 - 464346 | 44147.6 |
| coa transferase | PQ457_17980 | A9X6P9 | + | 464349 - 465587 | 43500.1 |
| iclr family transcriptional regulator | PQ457_17985 | P42968 | - | 465600 - 466313 | 25300.5 |
| hydroxymethylglutaryl-coa lyase | PQ457_17990 | O34873 | + | 466428 - 467390 | 34158.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.