Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | PQ457_01040 | Q9RT03 | + | 232192 - 232938 | 25767.5 |
| hypothetical protein | PQ457_01045 | Not Available | + | 232964 - 233179 | 8067.18 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PQ457_01050 | P23136 | + | 233157 - 233720 | 19827.7 |
| cytochrome b/b6 | PQ457_01055 | P23134 | + | 233731 - 235017 | 48150.2 |
| cytochrome c1 | PQ457_01060 | P23135 | + | 235041 - 235877 | 30438.4 |
| adenine phosphoribosyltransferase | PQ457_01065 | Q2GAK1 | + | 235997 - 236533 | 18446.6 |
| Trna-gly | Not Available | Not Available | + | 236629 - 236702 | Not Available |
| porin family protein | PQ457_01075 | Not Available | + | 237076 - 238308 | 44339.0 |
| transferrin-binding protein-like solute binding protein | PQ457_01080 | Not Available | + | 238350 - 240092 | 58360.0 |
| hypothetical protein | PQ457_01085 | Not Available | - | 240177 - 240473 | 10813.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.