Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | PQ457_17895 | L0TCG5 | - | 444129 - 444971 | 31212.9 |
| carboxymuconolactone decarboxylase family protein | PQ457_17900 | P96684 | - | 444968 - 445420 | 16993.4 |
| aldehyde dehydrogenase family protein | PQ457_17905 | O34660 | - | 445527 - 447002 | 51078.2 |
| gmc family oxidoreductase n-terminal domain-containing protein | PQ457_17910 | Q988C9 | - | 446999 - 448624 | 58781.4 |
| hypothetical protein | PQ457_17915 | Not Available | - | 448652 - 449092 | 15412.9 |
| cytochrome c | PQ457_17920 | P09787 | - | 449089 - 449517 | 15172.7 |
| fad-binding oxidoreductase | PQ457_17925 | P09788 | - | 449514 - 451073 | 57116.2 |
| mfs transporter | PQ457_17930 | A5ABG1 | - | 451085 - 452350 | 44045.6 |
| fad-binding oxidoreductase | PQ457_17935 | P56216 | - | 452436 - 453983 | 54768.9 |
| 4-hydroxyphenylacetate 3-hydroxylase n-terminal domain-containing protein | PQ457_17940 | A4IT51 | + | 454163 - 455623 | 53571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.