Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metalloregulator arsr/smtb family transcription factor | PQ457_17845 | Q88JD1 | + | 430244 - 430546 | 11366.8 |
| permease | PQ457_17850 | P45468 | + | 430548 - 431594 | 37437.8 |
| thioredoxin family protein | PQ457_17855 | Q58001 | + | 431606 - 431842 | 8425.35 |
| glycine zipper 2tm domain-containing protein | PQ457_17860 | Not Available | - | 431912 - 432292 | 13606.2 |
| duf3857 domain-containing protein | PQ457_17865 | Not Available | + | 432880 - 436365 | 127227.0 |
| aarf/abc1/ubib kinase family protein | PQ457_17870 | Q6AY19 | + | 436493 - 437857 | 48992.0 |
| helix-turn-helix domain-containing protein | PQ457_17875 | Q47129 | + | 437955 - 438878 | 33734.9 |
| tonb-dependent receptor | PQ457_17880 | P46359 | + | 438990 - 441593 | 92575.1 |
| aldehyde dehydrogenase family protein | PQ457_17885 | A0A6J4B898 | + | 441713 - 443122 | 49136.0 |
| alpha/beta hydrolase | PQ457_17890 | P95125 | + | 443190 - 444113 | 32722.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.