Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | PQ457_17795 | Q2NB98 | + | 422921 - 423502 | 21205.8 |
| cryptochrome/photolyase family protein | PQ457_17800 | A9CH39 | + | 423577 - 425091 | 57486.6 |
| duf2256 domain-containing protein | PQ457_17805 | Not Available | - | 425050 - 425220 | 6487.95 |
| duf393 domain-containing protein | PQ457_17810 | Q8W485 | - | 425249 - 425623 | 14476.0 |
| deoxyribodipyrimidine photo-lyase/cryptochrome family protein | PQ457_17815 | Q9KS67 | + | 425779 - 427323 | 57495.7 |
| arsenical resistance protein arsh | PQ457_17820 | Q7UC03 | - | 427332 - 428072 | 27801.4 |
| aquaporin family protein | PQ457_17825 | Q92R43 | - | 428069 - 428773 | 24357.9 |
| arsenate reductase arsc | PQ457_17830 | Q65IV4 | - | 428770 - 429273 | 17568.9 |
| arsenate reductase (glutaredoxin) | PQ457_17835 | Q92R44 | - | 429278 - 429712 | 15723.0 |
| metalloregulator arsr/smtb family transcription factor | PQ457_17840 | P28267 | - | 429775 - 430119 | 11804.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.