Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 tim barrel-domain containing protein | PQ457_17695 | Q5H7P5 | - | 388355 - 391882 | 127079.0 |
| sugar porter family mfs transporter | PQ457_17700 | P0AGF5 | + | 391982 - 393253 | 43951.5 |
| hypothetical protein | PQ457_17705 | Not Available | - | 393268 - 393489 | 8212.08 |
| rok family transcriptional regulator | PQ457_17710 | P55455 | + | 393481 - 394656 | 41489.1 |
| rok family protein | PQ457_17715 | P43468 | - | 394661 - 395554 | 31071.3 |
| tryptophan 7-halogenase | PQ457_17720 | Q8KHZ8 | - | 395582 - 397147 | 56864.7 |
| tonb-dependent receptor | PQ457_17725 | P0C6R0 | - | 397255 - 400281 | 108574.0 |
| yihy/virulence factor brkb family protein | PQ457_17730 | A1SB50 | - | 400457 - 401440 | 34989.3 |
| hypothetical protein | PQ457_17735 | Not Available | - | 401437 - 401676 | 8380.98 |
| translocation/assembly module tamb domain-containing protein | PQ457_17740 | Q57523 | - | 401686 - 405900 | 145929.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.