Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2339 domain-containing protein | PQ457_17645 | Not Available | - | 377287 - 380082 | 99245.0 |
| fumarylacetoacetase | PQ457_17650 | A5PKH3 | - | 380191 - 381522 | 47610.6 |
| voc family protein | PQ457_17655 | P45871 | - | 381480 - 382040 | 21016.7 |
| 4-hydroxyphenylpyruvate dioxygenase | PQ457_17660 | P80064 | - | 382040 - 383143 | 40843.4 |
| lrp/asnc family transcriptional regulator | PQ457_17665 | O07920 | + | 383300 - 383758 | 16515.9 |
| hypothetical protein | PQ457_17670 | Not Available | + | 383810 - 384064 | 9577.55 |
| mfs transporter | PQ457_17675 | O34691 | + | 384154 - 385734 | 55040.2 |
| methyl-accepting chemotaxis protein | PQ457_17680 | Not Available | - | 385937 - 386146 | 7781.36 |
| gdsl-type esterase/lipase family protein | PQ457_17685 | P54451 | - | 386152 - 386895 | 26556.2 |
| carboxylesterase family protein | PQ457_17690 | Q5XG92 | - | 386892 - 388358 | 51671.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.