Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ457_17545 | P27111 | - | 348818 - 349717 | 32710.7 |
| tonb-dependent receptor | PQ457_17550 | P46359 | + | 349849 - 352185 | 83637.3 |
| sulfatase-like hydrolase/transferase | PQ457_17555 | P50429 | + | 352209 - 353645 | 53202.4 |
| hypothetical protein | PQ457_17560 | Not Available | - | 353664 - 354053 | 14301.2 |
| peroxiredoxin | PQ457_17565 | P9WID8 | + | 354215 - 354772 | 19786.9 |
| thioredoxin family protein | PQ457_17570 | Q8XV41 | + | 354814 - 356055 | 42536.1 |
| sigma-70 family rna polymerase sigma factor | PQ457_17575 | G8QM61 | + | 356133 - 356648 | 19328.5 |
| nrsf family protein | PQ457_17580 | Not Available | + | 356650 - 357282 | 22171.9 |
| hypothetical protein | PQ457_17585 | Not Available | + | 357551 - 358645 | 39768.8 |
| tonb-dependent receptor | PQ457_17590 | A1JTG3 | - | 358685 - 360877 | 77936.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.