Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ457_17495 | P30864 | + | 336090 - 337028 | 34077.0 |
| alkene reductase | PQ457_17500 | P77258 | + | 337156 - 338292 | 40615.6 |
| mfs transporter | PQ457_17505 | P96675 | + | 338289 - 339455 | 39712.9 |
| alpha/beta hydrolase | PQ457_17510 | D5EV35 | - | 339472 - 340392 | 32819.5 |
| tonb-dependent receptor | PQ457_17515 | P46359 | - | 340542 - 342884 | 83320.5 |
| glycoside hydrolase family 68 protein | PQ457_17520 | O68609 | + | 343149 - 344315 | 42282.3 |
| laci family dna-binding transcriptional regulator | PQ457_17525 | O87590 | - | 344297 - 345301 | 35747.4 |
| alpha/beta hydrolase | PQ457_17530 | P71668 | - | 345369 - 346439 | 37627.9 |
| duf3237 domain-containing protein | PQ457_17535 | B3Q9N8 | + | 346514 - 347017 | 17967.7 |
| tannase/feruloyl esterase family alpha/beta hydrolase | PQ457_17540 | A0A0K8P8E7 | - | 347021 - 348751 | 60559.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.