Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | PQ457_17445 | P09099 | - | 319620 - 321071 | 50488.3 |
| glycoside hydrolase family 43 protein | PQ457_17450 | P49943 | - | 321076 - 322125 | 38965.0 |
| glycoside hydrolase family 9 protein | PQ457_17455 | Q05156 | + | 322345 - 324912 | 93062.6 |
| laci family dna-binding transcriptional regulator | PQ457_17460 | P46828 | + | 324941 - 325987 | 36759.0 |
| glycoside hydrolase family 43 protein | PQ457_17465 | P77713 | - | 325942 - 327606 | 62307.2 |
| mfs transporter | PQ457_17470 | P0AA79 | - | 327603 - 328790 | 42129.4 |
| tonb-dependent receptor | PQ457_17475 | A1AIE8 | + | 329180 - 332134 | 105049.0 |
| alpha-glucuronidase family glycosyl hydrolase | PQ457_17480 | B3PC73 | - | 332261 - 334354 | 76559.5 |
| methyl-accepting chemotaxis protein | PQ457_17485 | O22609 | - | 334677 - 335489 | 28603.5 |
| protein usg | PQ457_17490 | P12288 | - | 335544 - 335816 | 10643.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.